60 Populations Neighbor-Joining/UPGMA method version 3.6a3 Neighbor-joining method Negative branch lengths allowed +SA0421 +-25 +-26 +SAV0463 ! ! ! +MW0417 ! ! +--------FN0659 ! ! ! ! +ydcC ! ! ! ! ! +-3 +spyM18_031 ! ! ! ! +-1 ! ! ! +-----2 +SP0152 ! ! +-----------4 ! ! ! ! ! +spr0150 ! ! +----5 ! ! ! ! ! +ORF5 ! ! +--6 ! ! ! ! ! +yaeE_xa ! ! +-10 ! ! ! ! ! +MW0791 ! ! +------12 ! ! +-30 ! ! +SA0770 ! ! ! ! ! ! ! ! ! +SAV0838 ! ! ! ! ! ! ! +-18 +---------atmE ! ! ! ! ! +--8 ! ! ! ! ! +----11 +---------yaeE_xc ! ! ! ! ! ! ! ! ! ! +-21 +-17 +--PM1729 ! ! ! ! ! ! ! ! ! ! ! +--------XF0874 ! ! ! ! ! ! +--31 ! +-22 +--------BMEII0336 ! ! ! ! ! ! ! ! ! ! ! ! +lmo2418 ! ! ! ! ! ! +---------7 ! ! ! +-23 +-----15 +lin2513 ! ! ! ! ! ! ! ! ! +CC2668 ! ! ! ! ! ! ! ! +NMB1947 ! ! ! +-------13 ! ! ! +NMA0505 ! ! ! ! ! ! +aarA ! ! +----------9 ! ! +-----sfbC ! ! 27------36 +HP1577 ! ! +-39 ! ! ! ! +jhp1485 ! ! ! +-38 ! ! ! +abcD ! ! ! ! ! ! +TP0119 ! ! ! ! ! ! ! +-37 +--BH3480 ! ! ! ! ! +-33 ! ! ! ! ! ! +DR1357 ! ! ! ! +-35 ! ! ! ! ! +AGR_L_763 ! ! ! ! +-34 ! ! ! +-40 +Atu4488 ! ! ! ! ! ! +--41 ! ! +-yusB ! ! ! ! +-24 ! ! ! ! +-28 +-BA_0756 ! ! +-44 ! ! ! ! ! ! ! +------29 +-YPO1319 ! ! ! ! ! ! ! ! ! +Cgl0635 ! ! ! ! ! ! ! ! +--PA5504 ! ! ! +------32 ! ! ! +VC0906 ! ! ! ! ! ! +----------Cj0773c ! ! ! +-43 ! ! ! ! +---------STY0273 ! +--45 ! ! ! +-46 +lin0311 ! ! ! ! +------19 ! ! ! ! ! +lmo0283 ! ! ! +---42 ! ! ! ! +sfbC_st ! ! +-47 ! +-14 ! ! ! ! +----16 +STY0560 ! ! ! ! ! ! ! ! ! +-PA2351 ! ! ! ! ! ! ! +--------SCL11.14c ! +-48 ! ! +SPy0321 ! ! +------20 ! ! ! +------BA_0093 ! ! ! ! ! ! +CPn0279 ! ! ! +-49 ! +-51 +-50 +CP0479 ! ! ! ! ! ! ! +CPj0279 ! ! ! ! ! ! +SMc03158 ! +-52 +-53 ! ! +-54 +RSc0921 ! ! ! ! ! ! ! +mll4791 ! +-55 ! ! +yaeE_ecK ! ! +-56 ! ! ! +yaeE_ec0 ! +-57 ! ! +yaeE_st ! +-58 ! +YPO1072 ! +-CAC0985 remember: this is an unrooted tree! Between And Length ------- --- ------ 27 26 0.21659 26 25 0.00999 25 SA0421 0.00000 25 SAV0463 0.00000 26 MW0417 -0.00539 27 36 1.91648 36 31 0.88104 31 30 0.58663 30 FN0659 2.17317 30 23 0.81404 23 22 0.16264 22 21 0.38464 21 18 0.62563 18 12 1.91456 12 10 0.43228 10 6 0.82908 6 5 1.31460 5 4 2.94676 4 3 0.05384 3 ydcC -0.09653 3 2 1.45498 2 1 0.19449 1 spyM18_031 0.27183 1 SP0152 0.07067 2 spr0150 -0.18904 4 ORF5 -0.05107 5 yaeE_xa -1.71905 6 MW0791 -0.87214 10 SA0770 -0.82437 12 SAV0838 -0.43228 18 17 0.30889 17 11 1.49285 11 8 0.73432 8 atmE 2.45660 8 yaeE_xc 2.55750 11 PM1729 0.85743 17 XF0874 2.28245 21 BMEII0336 2.32444 22 15 1.75874 15 7 2.39385 7 lmo2418 -0.01271 7 lin2513 0.02691 15 CC2668 -1.40870 23 13 2.13834 13 NMB1947 0.28208 13 NMA0505 -0.24388 31 9 2.68640 9 aarA -0.40355 9 sfbC 1.59535 36 41 1.08804 41 39 0.66719 39 HP1577 -0.03401 39 38 0.03891 38 jhp1485 -0.01657 38 abcD 0.12047 41 45 1.05544 45 44 0.08757 44 40 0.84940 40 37 0.82377 37 TP0119 0.26530 37 35 0.32685 35 33 0.23195 33 BH3480 0.84082 33 DR1357 0.26698 35 34 0.17285 34 AGR_L_763 0.00000 34 Atu4488 0.00000 40 29 1.93855 29 28 0.45339 28 24 0.21736 24 yusB 0.51771 24 BA_0756 0.58229 28 YPO1319 0.37039 29 Cgl0635 0.19331 44 32 2.00936 32 PA5504 0.62999 32 VC0906 0.29451 45 48 0.87084 48 47 0.15586 47 46 0.58314 46 43 0.34917 43 Cj0773c 2.77169 43 STY0273 2.52211 46 42 1.16833 42 19 1.93017 19 lin0311 0.01343 19 lmo0283 -0.00383 42 16 1.44831 16 14 0.46382 14 sfbC_st 0.00000 14 STY0560 0.00000 16 PA2351 0.52588 47 SCL11.14c 2.27124 48 51 0.66638 51 20 2.12584 20 SPy0321 0.20554 20 BA_0093 1.71936 51 52 0.36407 52 50 0.81491 50 49 0.00000 49 CPn0279 0.00000 49 CP0479 0.00000 50 CPj0279 0.00000 52 55 0.26238 55 54 0.08633 54 53 0.07561 53 SMc03158 0.27484 53 RSc0921 0.29526 54 mll4791 0.36984 55 57 0.34818 57 56 0.02030 56 yaeE_ecK 0.00111 56 yaeE_ec0 0.00359 57 58 0.01235 58 yaeE_st 0.04410 58 YPO1072 0.06100 27 CAC0985 0.57746