59 Populations Neighbor-Joining/UPGMA method version 3.6a3 Neighbor-joining method Negative branch lengths allowed +-TP0120 ! ! +Cj0774c ! ! ! ! +sfbB ! ! ! ! ! ! +CC2669 ! ! ! ! ! ! ! ! +-------mll4792 ! ! ! ! +-8 ! ! ! ! ! ! +AbcC 4------16 ! +-----17 ! +--------3 ! ! ! ! ! +--9 ! +HP1576 ! ! ! ! ! ! ! +-2 ! ! ! ! ! ! ! +jhp1484 ! ! ! ! ! ! ! ! ! ! ! ! ! +---ORF4 ! ! ! ! +-----11 ! ! ! ! ! +-------SCL11.15c ! ! ! ! ! ! ! ! ! +---20 ! ! +SPy0320 ! +------24 ! ! +-10 +-6 ! ! ! ! ! ! ! +spyM18_031 ! ! ! ! ! ! +-5 ! ! ! ! +-----7 ! +spr0149 ! ! ! ! ! +------1 ! ! ! ! ! +SP0151 ! ! ! ! ! ! ! ! ! +AtmD ! ! +-27 ! ! ! ! ! +Atu4487 ! ! ! ! ! ! ! ! +---DR1356 ! ! ! ! +-23 ! ! ! ! ! +-----SMc03159 ! ! ! ! +-25 ! ! ! ! ! ! +CPn0280 ! ! ! ! ! ! +-21 ! +----29 +-26 +-22 +CP0478 ! ! ! ! ! ! ! +dppF_1 ! ! ! ! ! +---AGR_L_765 ! ! ! ! +abc_st ! ! ! ! +-32 +STY0274 ! ! ! ! +-42 +YPO1073 ! ! ! ! ! ! +abc_ecO ! +-45 +-46 ! ! ! +abc_ecK ! ! ! ! ! ! +PM1728 ! +-47 +-44 ! ! ! +HI0621 ! ! ! ! ! ! +VC0907 ! ! ! ! ! +-49 ! +SA0420 ! ! ! +-40 ! ! ! +-41 +SAV0462 ! ! ! ! ! ! ! ! ! +MW0416 ! +-50 ! ! ! ! +YPO1318 ! ! ! ! ! ! ! ! +yusC ! ! ! ! ! ! ! ! ! +-35 +XF0875 ! ! ! ! ! ! ! ! +-53 ! ! +-31 +PA5503 ! ! ! ! ! ! ! ! ! ! +---19 +NMB1948 ! ! ! ! ! ! ! ! ! ! +----15 +NMA0504 ! ! ! ! ! ! ! ! ! +-43 +-14 +RSc0920 ! ! ! ! ! ! +-12 ! ! ! ! ! +-13 +sfbB_st ! ! ! ! ! ! ! +-54 ! ! +STY0559 ! ! ! ! ! ! +-51 ! +SA0769 ! ! ! ! ! +-36 ! ! ! ! +-37 +SAV0837 ! ! ! ! ! ! ! ! ! +MW0790 ! ! +-52 ! ! ! ! ! ! +lin2514 ! ! ! ! +-34 ! ! ! ! +lmo2419 ! ! ! ! ! ! ! +BH3481 ! ! ! ! ! ! +Cgl0636 ! ! ! +----18 ! ! ! +-28 +--PA2350 ! +-56 ! ! ! ! +-30 +----BMEII0337 ! ! ! ! ! ! +-33 +------FN0660 ! ! ! ! ! ! +-48 +BA_0883 ! ! ! ! ! ! +-55 +BA_0757 ! ! ! ! ! ! ! ! +lmo0284 ! +-57 +-38 ! ! +lin0312 ! ! ! ! +abc_xa ! +-39 ! +abc_xc ! +CAC0984 remember: this is an unrooted tree! Between And Length ------- --- ------ 4 TP0120 0.95496 4 16 5.25070 16 Cj0774c -2.47675 16 24 5.33318 24 sfbB 0.18897 24 29 3.62786 29 27 1.30337 27 20 3.43208 20 17 4.25262 17 CC2669 -3.09583 17 11 4.38884 11 9 1.85510 9 8 1.32625 8 mll4792 5.01529 8 3 5.53638 3 AbcC -0.09366 3 2 0.11016 2 HP1576 -0.20467 2 jhp1484 0.24847 9 ORF4 2.24849 11 10 0.30959 10 SCL11.15c 4.98629 10 7 3.64056 7 6 1.13260 6 SPy0320 -1.00146 6 5 1.01156 5 spyM18_031 -1.56064 5 1 4.28179 1 spr0149 -0.00610 1 SP0151 0.00920 7 AtmD -0.98340 20 Atu4487 0.24421 27 26 1.43749 26 25 0.50479 25 23 1.32227 23 DR1356 2.33069 23 SMc03159 4.04671 25 22 1.71883 22 21 0.00000 21 CPn0280 0.00000 21 CP0478 0.00000 22 dppF_1 0.00000 26 AGR_L_765 2.76271 29 32 2.04931 32 abc_st -0.69162 32 42 0.46984 42 STY0274 -0.24226 42 45 0.20159 45 YPO1073 -0.02979 45 47 0.12165 47 46 0.04757 46 abc_ecO -0.00002 46 abc_ecK 0.00322 47 49 0.15807 49 44 0.26767 44 PM1728 0.03250 44 HI0621 0.21060 49 50 0.03187 50 VC0907 0.29773 50 53 0.12089 53 41 0.56447 41 40 0.00921 40 SA0420 0.00000 40 SAV0462 0.00000 41 MW0416 0.01919 53 54 0.09564 54 YPO1318 0.59735 54 56 0.07306 56 52 0.15951 52 51 0.03853 51 43 0.20073 43 35 0.28532 35 yusC -0.04423 35 31 1.48683 31 XF0875 0.45208 31 19 3.18541 19 PA5503 -2.49153 19 15 3.99191 15 NMB1948 -0.41791 15 14 0.42480 14 NMA0504 -0.66375 14 13 1.15120 13 12 0.31973 12 RSc0920 0.82037 12 sfbB_st 0.25403 13 STY0559 -0.31093 43 37 0.21965 37 36 0.00586 36 SA0769 0.00000 36 SAV0837 0.00000 37 MW0790 0.00384 51 34 0.43299 34 lin2514 0.01638 34 lmo2419 0.00272 52 BH3481 0.25829 56 57 0.02241 57 55 0.04640 55 48 0.10909 48 33 0.34018 33 30 1.72879 30 28 1.72457 28 18 4.08020 18 Cgl0636 -0.34832 18 PA2350 1.71972 28 BMEII0337 3.02250 30 FN0660 4.15138 33 BA_0883 -0.10530 48 BA_0757 0.20387 55 38 0.40248 38 lmo0284 0.00204 38 lin0312 0.01406 57 39 0.40223 39 abc_xa 0.02656 39 abc_xc 0.02564 4 CAC0984 0.28624