PhD Candidate (expected to graduate in May 2012)Department of Computer Science
University of Maryland, College Park
Here is my Curriculum Vitae
Advisor: Mihai Pop
I am interested in job positions that involve high-performance computing and quantitative modeling of large-scale data sets.
Research Interests:
Genome assembly: comparative assembly in metagenomics.
Sequence classification: hierarchical classification within taxonomic tree.
Network analysis: statistical comparison of metabolic networks.
Statistical relational learning: modeling microbial interactions.
High-performance computing and machine learning.
News:
(05/03/11) A NEW version of MetaPhyler specifically for short reads is available. It can analyze 10 million metagenomic Illumina reads in 50 minutes on a single processor. Parallelization using multiple threads is also available.
Download MetaPhylerSRV0.115.tar.gz(30MB)